I would like to understand the structure of these h5 files to enable conversion from Elastix .nii file to .h5 file.
However, I do not understand all the values that are in the file. It contains a group “TransformGroup” which in turn contains groups “0”, “1” and “2”.
For example, “1” and “2” contains a dataset “TransformFixedParameters”. But I don’t understand what the values represent.
Thank you, but not really. I am not that familial with C++. I read the code and the method WriteFixedParameters but I can’t figure out what information transformFixedNameMisspelled, transformParamsNameMisspelled and transformFixedName store. in the ANTs-HDF5-file.
The TransformFixedParameters are the transformation parameters that are not optimized during registration. Other parameters are optimized during registration. Transform parameters are described in the ITK Software Guide.