I have a 3D microCT image about a tissue sample. And I use a ultramicrotome to get some ultrathin sections(slices) of the tissue. Then I get these slices’ 2D images using electron microscope. How can I use itk to register these 2D images to the 3D image in python. I am new in itk.
The 2D slice images are independent, so just one 2D image registers to the 3D image every time.
Any suggestions will be helpful.
Thanks
Take a look at relevant repositories on GitHub. Also, TwoProjectionRegistration might be of interest. Look in the wrapping directory to see which classes are available via Python interface, e.g. TwoProjection.