I have an image with three or four labels and i want to merge two of them and label it as a single label. How to do it? Convert 3D GUI is not helping me regarding this. Any way through ITK Snap or slicer or ITK modules available to do this?
I suspect the ChangeLabelImageFilter is probably what you want.
You could also do it through Slicer. Import the label map into Segmentations module, edit the segment, apply logical operation Add
, remove the label you just “added”, and export to label map again.