Built ITK 5.2.1 with Module SkullStrip - Multiple defined symbols error

Tom89 · December 20, 2021, 2:28pm

Hi,

I built ITK 5.2.1 with the SkullStrip module enabled. When I try to use the itkStripTsImageFilter class, I get an “one or more multiply defined symbols found” error.

|Error|LNK1169|one or more multiply defined symbols.

|Error|LNK2005|protected: virtual void __cdecl itk::CostFunctionTemplate::PrintSelf(class std::basic_ostream<char,struct std::char_traits > &,class itk::Indent)const (?PrintSelf?$CostFunctionTemplateNitkMEBAXAEAV?$basic_ostreamDU?$char_traitsDstdstdVIndent2Z) already defined in …\ITKOptimizers-5.2.lib(ITKOptimizers-5.2.dll)|1||

I am using the code from this example:

github.com

cactuxx/skullStrip/blob/master/test/SkullStripping.cxx

/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

/* SkullStripping.cxx
This is a demo program for testing the itkStripTsImageFilter for automatic skull-stripping.

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All other classes and external modules (e.g. Module_Cuberille, Module_MGHIO, …) are working.

Anything I am missing? Can anyone tell me an ITK version for which this filter is working?

Thank you!

dzenanz · December 20, 2021, 3:16pm

This seems more like a problem with your ITK build than SkullStrip module. If you were doing incremental builds, try a clean build. If this is a fresh build, please provide a complete build log for the example.