Slice 3D volume along a specific axis using python ITK

[dzenanz (Dženan Zukić)]

You could take a look at this thread:

RegionOfInterestImageFilter to extract image slice from volume

Hello, I’d like to extract a 2D slice from a MRI NIfTI file. I believe the RegionOfInterestImageFilter function in itk will do the job: https://itk.org/ITKExamples/src/Filtering/ImageGrid/ExtractRegionOfInterestInOneImage/Documentation.html However, I’m having difficulties using this function in Python. I’ve tried writing the code this way, without success: image_slice11 = itk.region_of_interest_filter(image, [512,512,1], [0,0,11]) Can you provide advice on how that should be implemented? B…