Convert .nii.gz warp to .h5 (with proper header)

Hi @dzenanz, thanks for responding!

Just to make sure, do you mean something like:

import SimpleITK as sitk
import nibabel as nib

# Load nifti warp
img = nib.load(nifti_file)
data = img.get_fdata()

# Define and save ITK warp
displacement_image = sitk.GetImageFromArray(data, isVector=True)
tx = sitk.DisplacementFieldTransform(displacement_image)
sitk.WriteTransform(tx, "out_warp.h5");

Best,
Steven