# Community

**URL:** https://discourse.itk.org/c/community/8.md?page=2

[Latest](https://discourse.itk.org/latest.md) · [Categories](https://discourse.itk.org/categories.md) · [Tags](https://discourse.itk.org/tags.md)

**Page:** 3

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## [Transform Point from Affine Transform](https://discourse.itk.org/t/transform-point-from-affine-transform/4429)

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**Author:** [@kleingeo](https://discourse.itk.org/u/kleingeo)\
**Replies:** 1\
**Last updated:** [September 17, 2021, 6:53pm UTC](https://discourse.itk.org/t/transform-point-from-affine-transform/4429 "2021-09-17T18:53:32Z")

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I have a question regarding transforming a point with an affine transform. I have applied an affine transform (translation, rotation, scaling) two images (image and its segmentations) and after resampling it is working a…

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## [Does anyone know where to download the file "GraphCut3D/ImageMultiLabelGridCutFilter.h".](https://discourse.itk.org/t/does-anyone-know-where-to-download-the-file-graphcut3d-imagemultilabelgridcutfilter-h/4353)

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**Author:** [@wulicheng](https://discourse.itk.org/u/wulicheng)\
**Replies:** 9\
**Last updated:** [September 15, 2021, 6:35pm UTC](https://discourse.itk.org/t/does-anyone-know-where-to-download-the-file-graphcut3d-imagemultilabelgridcutfilter-h/4353 "2021-09-15T18:35:03Z")

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Whe I download and build the project “”, I can not find the file “AlphaExpansion\_3D\_6C\_MT.h”, where include in “GraphCut3D/ImageMultiLabelGridCutFilter.h” like this: can anyone give me a websit to download this file…

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## [ITK, Matt at CppCast](https://discourse.itk.org/t/itk-matt-at-cppcast/4388)

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**Author:** [@Niels\_Dekker](https://discourse.itk.org/u/Niels_Dekker)\
**Replies:** 2\
**Last updated:** [September 5, 2021, 3:01pm UTC](https://discourse.itk.org/t/itk-matt-at-cppcast/4388 "2021-09-05T15:01:29Z")

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Well done, @matt.mccormick :+1: :+1: :+1: Nice discussion of you with those C++ specialists, Rob Irving and Jason Turner at Insight Toolkit with Matt McCormick • CppCast - Podcast Addict ! My LKEB colleague Baldur va…

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## [Patches for ITK 5.2.1](https://discourse.itk.org/t/patches-for-itk-5-2-1/4323)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 3\
**Last updated:** [August 11, 2021, 8:06pm UTC](https://discourse.itk.org/t/patches-for-itk-5-2-1/4323 "2021-08-11T20:06:03Z")

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Hi folks, The next patch (bugfix) release, ITK 5.2.1, is coming up. Patches currently staged on the Git release branch are: Bradley Lowekamp (7): BUG: Register ComposeScaleSkewVersor3DTransform transform B…

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## [Job Opportunities at Kitware: Software Developer - Medical Computing](https://discourse.itk.org/t/job-opportunities-at-kitware-software-developer-medical-computing/4324)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 0\
**Last updated:** [August 10, 2021, 12:26am UTC](https://discourse.itk.org/t/job-opportunities-at-kitware-software-developer-medical-computing/4324 "2021-08-10T00:26:58Z")

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Hi folks, There are job opportunities to work on ITK and open source scientific tools at Kitware. For example, the Software Developer - Medical Computing position: Team Description: Kitware’s Medical Computing team sol…

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## [DICOM/ITK/VTK/Qt developer is needed in South Korea.](https://discourse.itk.org/t/dicom-itk-vtk-qt-developer-is-needed-in-south-korea/4284)

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**Author:** [@samuel0park](https://discourse.itk.org/u/samuel0park)\
**Replies:** 0\
**Last updated:** [July 22, 2021, 3:03am UTC](https://discourse.itk.org/t/dicom-itk-vtk-qt-developer-is-needed-in-south-korea/4284 "2021-07-22T03:03:10Z")

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Cure-In Inc. is a startup company who are developing an Image guided intervention robot. We have been working on this project for last 8 years as a research team of National Cancer Center (Goyang, South Korea). In our …

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## [Faster debug exes in Visual Studio](https://discourse.itk.org/t/faster-debug-exes-in-visual-studio/4112)

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**Author:** [@dzenanz](https://discourse.itk.org/u/dzenanz)\
**Replies:** 0\
**Last updated:** [May 10, 2021, 4:32pm UTC](https://discourse.itk.org/t/faster-debug-exes-in-visual-studio/4112 "2021-05-10T16:32:54Z")

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Microsoft recently announced some important performance improvements for debug builds. I hope ITK-based applications will benefit from this a lot, as the difference between debug and release builds is an order of magnitu…

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## [Job opportunities at Kitware](https://discourse.itk.org/t/job-opportunities-at-kitware/3993)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 1\
**Last updated:** [April 8, 2021, 12:39am UTC](https://discourse.itk.org/t/job-opportunities-at-kitware/3993 "2021-04-08T00:39:13Z")

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There are several job opportunities for talented software developers and research and development engineers in the Medical Group at Kitware. We are open to candidates who can work from one of our branch offices or remote…

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## [Issue with SetSpacing](https://discourse.itk.org/t/issue-with-setspacing/4011)

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**Author:** [@archsci](https://discourse.itk.org/u/archsci)\
**Replies:** 1\
**Last updated:** [April 5, 2021, 8:00pm UTC](https://discourse.itk.org/t/issue-with-setspacing/4011 "2021-04-05T20:00:27Z")

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Hello, I am trying to create an itk image from numpy array. I have, itkImg = itk.GetImageFromArray(array) itkImg.SetOrigin(\[1.0, 1.0, 1.0\]) itkImg.SetSpacing(\[1.0, 2.0, 2.0\]) After creating the image, I want to change…

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## [git review-push failing login to GitHub](https://discourse.itk.org/t/git-review-push-failing-login-to-github/3969)

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**Author:** [@rflanz](https://discourse.itk.org/u/rflanz)\
**Replies:** 1\
**Last updated:** [March 18, 2021, 8:50pm UTC](https://discourse.itk.org/t/git-review-push-failing-login-to-github/3969 "2021-03-18T20:50:36Z")

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Hi, I have a fix branch that I would like to submit for pull request. When I issue a git review-push I get the GitHub login dialog, but my credentials do not work and I always get an error to push the branch. I have a…

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## [Where to place bugfix found in 5.1.2 release](https://discourse.itk.org/t/where-to-place-bugfix-found-in-5-1-2-release/3962)

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**Author:** [@rflanz](https://discourse.itk.org/u/rflanz)\
**Replies:** 2\
**Last updated:** [March 17, 2021, 3:06pm UTC](https://discourse.itk.org/t/where-to-place-bugfix-found-in-5-1-2-release/3962 "2021-03-17T15:06:19Z")

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I have found a bug in the 5.1.2 release and wish to make post a fix which I believe should fix the issue. Are there ongoing patch releases for 5.1.2, or is it better to post the fix to the 5.2 release candidate, which l…

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## [ITK Examples St. Patty’s Day 2021 Hackathon](https://discourse.itk.org/t/itk-examples-st-patty-s-day-2021-hackathon/3939)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 1\
**Last updated:** [March 17, 2021, 2:00pm UTC](https://discourse.itk.org/t/itk-examples-st-patty-s-day-2021-hackathon/3939 "2021-03-17T14:00:46Z")

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We are holding a hackathon for the ITK Sphinx Examples on St. Patty’s Day. :shamrock: :rainbow: Date: 2021, March 17th Time: 10 AM - 5 PM Eastern Time Where: https://meet.google.com/ycm-dfjb-wjv Current list of examp…

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## [ITK 5.2 rc2 solved a multiprocessing issue - thanks!](https://discourse.itk.org/t/itk-5-2-rc2-solved-a-multiprocessing-issue-thanks/3882)

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**Author:** [@jond01](https://discourse.itk.org/u/jond01)\
**Replies:** 1\
**Last updated:** [March 8, 2021, 6:28pm UTC](https://discourse.itk.org/t/itk-5-2-rc2-solved-a-multiprocessing-issue-thanks/3882 "2021-03-08T18:28:51Z")

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I have just tested the release candidate for version 5.2 of itk and wanted to share with you that it solved a previous issue with multiprocessing (as promised in the release notes :slight\_smile:). Also, I did not encoun…

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## [reporting broken links](https://discourse.itk.org/t/reporting-broken-links/3900)

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**Author:** [@Diego\_C](https://discourse.itk.org/u/Diego_C)\
**Replies:** 4\
**Last updated:** [February 26, 2021, 3:45am UTC](https://discourse.itk.org/t/reporting-broken-links/3900 "2021-02-26T03:45:40Z")

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Hi ITK’ers, Just thought of reporting this: https://insightsoftwareconsortium.github.io/SimpleITK-Notebooks/Python\_html/05\_Results\_Visualization.html The list of links in that page (at the top of the page) is broken. …

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## [StatisticsImageFilter does not work with sub region](https://discourse.itk.org/t/statisticsimagefilter-does-not-work-with-sub-region/3752)

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**Author:** [@Xinbo\_Li](https://discourse.itk.org/u/Xinbo_Li)\
**Replies:** 2\
**Last updated:** [January 11, 2021, 2:08pm UTC](https://discourse.itk.org/t/statisticsimagefilter-does-not-work-with-sub-region/3752 "2021-01-11T14:08:39Z")

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I tried to get mean intensity of a sub region in an image by using the StatisticsImageFilter. Turns out that the filter does not work with sub region. I used the 3 set region methods of the class and tried all possible…

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## [RFC: Toward supporting distribution of VTK based modules on PyPI](https://discourse.itk.org/t/rfc-toward-supporting-distribution-of-vtk-based-modules-on-pypi/3722)

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**Author:** [@jcfr](https://discourse.itk.org/u/jcfr)\
**Replies:** 0\
**Last updated:** [December 21, 2020, 8:20pm UTC](https://discourse.itk.org/t/rfc-toward-supporting-distribution-of-vtk-based-modules-on-pypi/3722 "2020-12-21T20:20:02Z")

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At Kitware, we would like to support the ability to package and distribute any VTK based modules on PyPI (Python Package Index). If you would like to see this happen, read and “heart” the following discourse post, and d…

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## [Research associate/postdoc position](https://discourse.itk.org/t/research-associate-postdoc-position/3693)

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**Author:** [@ntustison](https://discourse.itk.org/u/ntustison)\
**Replies:** 0\
**Last updated:** [December 9, 2020, 8:32pm UTC](https://discourse.itk.org/t/research-associate-postdoc-position/3693 "2020-12-09T20:32:42Z")

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Research associate/postdoc starting from May 1 2021 for a year. Requirement: PhD in Engineering or Science with 0-3 years of experience in image processing. Prior experience in working with medical image data is a plus.…

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## [Patches for ITK 5.1.2](https://discourse.itk.org/t/patches-for-itk-5-1-2/3635)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 16\
**Last updated:** [December 8, 2020, 5:30pm UTC](https://discourse.itk.org/t/patches-for-itk-5-1-2/3635 "2020-12-08T17:30:17Z")

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Hi folks, The next patch (bugfix) release, ITK 5.1.2, is coming up. Patches currently staged on the Git release branch are: Bradley Lowekamp (4): COMP: Updating ITKSimpleITKFilters remote module BUG: Addre…

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## [How to pass C++ itk::Image to Python](https://discourse.itk.org/t/how-to-pass-c-itk-image-to-python/3547)

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**Author:** [@cchriste](https://discourse.itk.org/u/cchriste)\
**Replies:** 8\
**Last updated:** [November 24, 2020, 4:07pm UTC](https://discourse.itk.org/t/how-to-pass-c-itk-image-to-python/3547 "2020-11-24T16:07:11Z")

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We have a C++ application-specific class that uses an ITK image under the hood. We also expose a Python interface to our class from which we want to provide access to its itk::Image member. Best guess at how this might …

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## [Adaptive denoising filter in ITK?](https://discourse.itk.org/t/adaptive-denoising-filter-in-itk/3480)

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**Author:** [@ntustison](https://discourse.itk.org/u/ntustison)\
**Replies:** 8\
**Last updated:** [September 28, 2020, 6:19pm UTC](https://discourse.itk.org/t/adaptive-denoising-filter-in-itk/3480 "2020-09-28T18:19:05Z")

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I’m guessing this is a question for @matt.mccormick and potentially others (e.g., @blowekamp @hjmjohnson). With the most recent FreeSurfer release, the developers added some ITK-based functionality originally developed…

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## [Integrating ITK and VTK - a Survey](https://discourse.itk.org/t/integrating-itk-and-vtk-a-survey/3425)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 0\
**Last updated:** [September 2, 2020, 2:42am UTC](https://discourse.itk.org/t/integrating-itk-and-vtk-a-survey/3425 "2020-09-02T02:42:53Z")

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Dear ITK, VTK, 3D Slicer, and ParaView communities, We need your input! We would like community feedback on our plans to create an enhanced version of the Visualization Toolkit (VTK) that includes the image segmentation…

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## [Patches for ITK 5.1.1](https://discourse.itk.org/t/patches-for-itk-5-1-1/3365)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 2\
**Last updated:** [August 6, 2020, 2:14pm UTC](https://discourse.itk.org/t/patches-for-itk-5-1-1/3365 "2020-08-06T14:14:46Z")

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Hi folks, The next patch (bugfix) release, ITK 5.1.1, is coming up. Patches currently staged on the Git release branch are: Antoine Robert (1): ENH: Use Numpy bridge with array of dimension 1 Bradley Lowekamp (…

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## [Patches for ITK 4.13.3](https://discourse.itk.org/t/patches-for-itk-4-13-3/3304)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 0\
**Last updated:** [July 20, 2020, 4:03pm UTC](https://discourse.itk.org/t/patches-for-itk-4-13-3/3304 "2020-07-20T16:03:15Z")

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Hi folks, For the next, likely final on the 4.X series, patch (bugfix) release, ITK 4.13.3, the currently staged commits on the Git release-4.13 branch are: Bradley Lowekamp (7): BUG: Patch missing const qualifie…

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## [Why is the first axis swapped in ITK versus SimpleITK?](https://discourse.itk.org/t/why-is-the-first-axis-swapped-in-itk-versus-simpleitk/3055)

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**Author:** [@jonasteuwen](https://discourse.itk.org/u/jonasteuwen)\
**Replies:** 3\
**Last updated:** [May 15, 2020, 10:25am UTC](https://discourse.itk.org/t/why-is-the-first-axis-swapped-in-itk-versus-simpleitk/3055 "2020-05-15T10:25:08Z")

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I want to read a DICOM series with ITK (5.1rc) and compare it with the SimpleITK version: def read\_dcm\_series\_sitk(files): file\_reader = sitk.ImageFileReader() file\_reader.SetFileName(str(files\[0\])) file\_rea…

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## [Simple ITK documentation - Not working](https://discourse.itk.org/t/simple-itk-documentation-not-working/2995)

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**Author:** [@gattia](https://discourse.itk.org/u/gattia)\
**Replies:** 2\
**Last updated:** [April 22, 2020, 8:48pm UTC](https://discourse.itk.org/t/simple-itk-documentation-not-working/2995 "2020-04-22T20:48:03Z")

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Hi, I wasnt sure where to mention this, so I figured here was best. It seems like the simple itk documentation is down (or changed addresses?). I tried navigating to some of the google links for specific topics and fou…

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## [New SimpleITK.org site and Doxygen URL](https://discourse.itk.org/t/new-simpleitk-org-site-and-doxygen-url/2985)

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**Author:** [@blowekamp](https://discourse.itk.org/u/blowekamp)\
**Replies:** 0\
**Last updated:** [April 21, 2020, 2:17pm UTC](https://discourse.itk.org/t/new-simpleitk-org-site-and-doxygen-url/2985 "2020-04-21T14:17:11Z")

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SimpleITK’s home page has been modernized and revamped! Please check out the update: https://simpleitk.org/ A thanks goes to Kitware for continuing to maintain the URL. The site is now hosted by GitHub Pages and includ…

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## [ITK Community Survey 2019 Summary](https://discourse.itk.org/t/itk-community-survey-2019-summary/2873)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 0\
**Last updated:** [March 24, 2020, 10:12pm UTC](https://discourse.itk.org/t/itk-community-survey-2019-summary/2873 "2020-03-24T22:12:52Z")

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Since 1999, the Insight Toolkit (ITK) has been revolutionizing the way medical images are explored and analyzed. In addition to providing a robust infrastructure for the dissemination of complex algorithms across differe…

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## [ITKExamples Hackathon at ISBI Iowa 2020](https://discourse.itk.org/t/itkexamples-hackathon-at-isbi-iowa-2020/2788)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 1\
**Last updated:** [March 13, 2020, 3:01pm UTC](https://discourse.itk.org/t/itkexamples-hackathon-at-isbi-iowa-2020/2788 "2020-03-13T15:01:02Z")

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At ISBI 2020, @dzenanz, @hjmjohnson, and I will organize a hackathon to update and add new ITKExamples. We will update the examples to bring them up to speed with ITK 5.1, put finishing touches on the Wiki Examples migra…

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## [Zenodo citation author ORCID iD's and affiliations](https://discourse.itk.org/t/zenodo-citation-author-orcid-ids-and-affiliations/2746)

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**Author:** [@matt.mccormick](https://discourse.itk.org/u/matt.mccormick)\
**Replies:** 0\
**Last updated:** [February 19, 2020, 6:05pm UTC](https://discourse.itk.org/t/zenodo-citation-author-orcid-ids-and-affiliations/2746 "2020-02-19T18:05:27Z")

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Hi folks, We now have a Zenodo record for ITK :tada: . For more information on Zenodo, see https://help.zenodo.org/features/. This enables publications to cite a specific version of ITK, which is important for reproduci…

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## [ITK software guide 4.1.5 RGB Images](https://discourse.itk.org/t/itk-software-guide-4-1-5-rgb-images/2726)

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**Author:** [@Nadim\_Farhat](https://discourse.itk.org/u/Nadim_Farhat)\
**Replies:** 2\
**Last updated:** [February 19, 2020, 10:52am UTC](https://discourse.itk.org/t/itk-software-guide-4-1-5-rgb-images/2726 "2020-02-19T10:52:55Z")

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Hi All, I am initiating a discussion in regards to paragraph 4.1.5 RGB Images : . Please note I am not a neuroscientist but the bolded statements are not relaying the intended information " The rods, on the other hand,…

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